Log in

Login to your account

Username *
Password *
Remember Me

2017

Dvořák P, Nikel PI, Damborský J, de Lorenzo V., Bioremediation 3.0: Engineering pollutant-removing bacteria in the times of systemic biology. Biotechnol Adv. 2017 Aug 5. pii: S0734-9750(17)30089-7. doi: 10.1016/j.biotechadv.2017.08.001. [Epub ahead of print] Review. PMID:28789939. https://www.ncbi.nlm.nih.gov/pubmed/28789939

Martínez-García E, de Lorenzo V., Molecular tools and emerging strategies for deep genetic/genomic refactoring of Pseudomonas. Curr Opin Biotechnol. 2017 Jul 21;47:120-132. doi: 10.1016/j.copbio.2017.06.013. [Epub ahead of print] Review. PMID:28738232. https://www.ncbi.nlm.nih.gov/pubmed/28738232

de Lorenzo V, Schmidt M. Biological standards for the Knowledge-Based BioEconomy: What is at stake. N Biotechnol. 2017 May 4. pii: S1871-6784(16)32621-8. doi: 10.1016/j.nbt.2017.05.001. [Epub ahead of print] Review.
PMID: 28479235. https://www.ncbi.nlm.nih.gov/pubmed/28479235

Goñi-Moreno Á, Benedetti I, Kim J, de Lorenzo V. Deconvolution of Gene Expression Noise into Spatial Dynamics of Transcription Factor-Promoter Interplay. ACS Synth Biol. 2017 Jul 21;6(7):1359-1369. doi: 10.1021/acssynbio.6b00397. Epub 2017 Apr 17. PMID:28355056. https://www.ncbi.nlm.nih.gov/pubmed/28355056

Sánchez-Pascuala A, de Lorenzo V, Nikel PI., Refactoring the Embden-Meyerhof-Parnas Pathway as a Whole of Portable GlucoBricks for Implantation of Glycolytic Modules in Gram-Negative Bacteria. ACS Synth Biol. 2017 May 19;6(5):793-805. doi: 10.1021/acssynbio.6b00230. Epub 2017 Feb 9. PMID:28121421. https://www.ncbi.nlm.nih.gov/pubmed/28121421

2016

Martínez-García, E. and de Lorenzo V. (2016) The quest for the minimal bacterial genome. Curr Op Biotechnol 42: 216-224. http://dx.doi.org/10.1016/j.copbio.2016.09.001

de las Heras, A., Martinez-Garcia, E., Domingo-Sananes, M.R., Fraile, S. and de Lorenzo, V. (2016) Rationally rewiring the connectivity of the XylR/Pu regulatory node of the m-xylene degradation pathway in Pseudomonas putida Integr Biol. V 8. 571 - 76 http://dx.doi.org/10.1039/c5ib00310e

Arce-Rodríguez, A., Calles, B., Nikel, P-I. and de Lorenzo, V. (2016) The RNA chaperone Hfq enables the environmental stress tolerance super-phenotype of Pseudomonas putida. Env Microbiol. 18(10):3309-3326. http://dx.doi.org/10.1111/1462-2920.13052

Kim, J., Pérez-Pantoja, D., Silva-Rocha, R., Oliveros, J.C. and de Lorenzo, V. (2016) High-resolution analysis of the m-xylene/toluene biodegradation subtranscriptome of Pseudomonas putida mt-2. Env Microbiol. 18(10):3327-3341. http://dx.doi.org/10.1111/1462-2920.13054

Martínez-García E, Aparicio T, de Lorenzo V, Nikel PI (2016) Engineering Gram-negative microbial cell factories using transposon vectors. Methods Mol Biol. 1498: 273-293. http://dx.doi.org/10.1007/978-1-4939-6472-7_18

Rodriguez-Espeso, D., Martínez García, E., de Lorenzo, V. and Goñi-Moreno (2016) Physical forces shape group identity of swimming Pseudomonas putida cells. Front Microbiol 7: 1437. http://dx.doi.org/10.3389/fmicb.2016.01437

van Heck Ruben G. A., Ganter Mathias, Martins dos Santos Vitor A. P., Stelling Joerg, Efficient Reconstruction of Predictive Consensus Metabolic Network Models. August 26, 2016 http://dx.doi.org/10.1371/journal.pcbi.1005085

de Lorenzo, V., Marlière, P. and Solé, R. (2016) Bioremediation at a global scale: from the test tube to planet Earth. Microb Biotech 9: 618-625 http://dx.doi.org/10.1111/1751-7915.12399

Nikel, P.I., Pérez-Pantoja and de Lorenzo V. (2016) Pyridine nucleotide transhydrogenases enable redox balance of Pseudomonas putida during biodegradation of aromatic compounds. Environ Microbiol.(2016) 6, http://dx.doi.org/10.1111/1462-2920.13434

Aparicio, T., Ingemann, S., Nielsen A., de Lorenzo V. and Martínez-García (2016) The Ssr protein (T1E_1405) from Pseudomonas putida DOT-T1E enables oligonucleotide-based recombineering in platform strain P. putida EM42. Biotechnol J. 11, 1309–1319 http://dx.doi.org/10.1002/biot.201600317

Schmidt M. and de Lorenzo, V. (2016). Synthetic bugs on the loose: containment options for deeply engineered (micro)organisms. Curr Op Biotechnol. Volume 38, April 01, 2016, Pages 90-96  http://dx.doi.org/10.1016/j.copbio.2016.01.006

Benedetti, I., Nikel, P.I. and de Lorenzo, V. (2016) Data on the standardization of a cyclohexanone-responsive expression system for Gram-negative bacteria. Data in Brief. 6(2016)738–744 http://dx.doi.org/10.1016/j.dib.2016.01.022

Rebecca M. Demming, Konrad B. Otte, Bettina M. Nestl, and Bernhard Hauer: " Optimized reaction conditions enable the hydration of non-natural substrates by the oleate hydratase from Elizabethkingia meningoseptica", Chemical catalysis catalytical chemistry (ChemCatChem) 2016, in press.

Koehorsty Jasper J, van Dam Jesse CJ, van Heck Ruben GA, Saccenti Edoardo, Martins dos Santos Vitor AP, Suarez-Diez Maria, Schaap Peter J, Comparison of 432 Pseudomonas strains through integration of genomic, functional, metabolic and expression data.  Scientific reports (Accepted, not published).

2015

Benedetti, I., de Lorenzo, V. and Nikel, P.I. (2015) Genetic programming of catalytic Pseudomonas putida biofilms for boosting biodegradation of haloalkanes. Metab. Eng. 33:109-18 http://dx.doi.org/10.1016/j.ymben.2015.11.004

Calles, B., de Lorenzo V. (2015) Knock-In-Leave-Behind (KILB): genetic grafting of protease-cleaving sequences into permissive sites of proteins with a Tn5-based transposition system McGenity et al. (eds.), Springer-Verlag. Hydrocarbon and Lipid Microbiology Protocols. http://dx.doi.org/10.1007/8623_2015_114

Guantes, R., Benedetti, I., Silva-Rocha, R., and de Lorenzo, V. (2015) Transcription factor levels enable metabolic diversification of single cells of environmental bacteria. ISME Journal (2015), 1–12ISME Journal, 1–12 http://dx.doi.org/10.1038/ismej.2015.193

de Lorenzo, V. (2015) Introduction to Genetic, Genomic and Systemic analyses for pure cultures. McGenity et al. (eds.), Springer-Verlag. Hydrocarbon and Lipid Microbiology Protocols. http://dx.doi.org/10.1007/8623_2016_192

de Lorenzo, V. (2015) Introduction to Systems and Synthetic Biology in Hydrocarbon Microbiology: Applications. McGenity et al. (eds.), Springer-Verlag. Hydrocarbon and Lipid Microbiology Protocols. http://dx.doi.org/10.1007/8623_2016_196

empowerlogo.fw

Calendar

November, 2017
MonTueWedThuFriSatSun
30
31
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
1
2
3
4
5
6
7
8
9
10

flag yellow low

 

This project has received funding from the European Union’s Horizon 2020

research and innovation programme under grant agreement No 635536.

Go to top